BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031G09SP1|AL429461
(773 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig924 1367 0.0
>3x_Contig924
Length = 2007
Score = 1367 bits (678), Expect = 0.0
Identities = 741/774 (95%), Gaps = 1/774 (0%)
Strand = Plus / Plus
Query: 1 taccattgatacttcaccgaatactggttttttagaataagttgatacgatatgtgaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 taccattgatacttcaccgaatactggttttttagaataagttgatacgatatgtgaaat 341
Query: 61 aataccgaatccaggaataattaaaatataaacttcggggtgaccaaagaatccaaatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aataccgaatccaggaataattaaaatataaacttcggggtgaccaaagaatccaaatct 401
Query: 121 aaataatatattatcttttccccaaatattatttttgataawarmaaaarwagactctat 180
||||||||||||||||||||||||||||||||||||||||| | | |||||||||
Sbjct: 402 aaataatatattatcttttccccaaatattatttttgataatagcacgggtagactctat 461
Query: 181 aatatatatctcatatataatatatgaccttattattaataagtgattmcgactgtacat 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 462 aatatatatctcatatataatatatgaccttattattaataagtgattccgactgtacat 521
Query: 241 taagcaatattattatatcacccattggtgaagcagtctgtagcgatcagaatatataat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 taagcaatattattatatcacccattggtgaagcagtctgtagcgatcagaatatataat 581
Query: 301 tatatatattataaccgacggtctaaatctgagaaaawgttgaccgaaccaccaatgttg 360
|||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 582 tatatatattataaccgacggtctaaatctgagaaattgttgaccgtaccaccaatgttg 641
Query: 361 caaaaaaaaaaaaawataaaatactagaraatagtatatttatctcttctccccatatct 420
|| | | || | | ||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 642 cattatataatatatatataatactagaaaatagtatatttatctcttctccccatatct 701
Query: 421 tcttatcagcttagstgggaagaagatatggggggggtattaaaaaaggtaaatcccttg 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tcttatcagcttagctgggaagaagatatggggggggtattaaaaaaggtaaatcccttg 761
Query: 481 gatggtgtccgaataagagaataataaatatttagtctcttaatttatatatatatatta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gatggtgtccgaataagagaataataaatatttagtctcttaatttatatatatatatta 821
Query: 541 agagagatataatctttttatttttcatatcaacattgttatatcttttctaattaactt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 agagagatataatctttttatttttcatatcaacattgttatatcttttctaattaactt 881
Query: 601 aagttaaactatttcctttgtttcaatattttttatttatactaataaaakatgattatt 660
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 882 aagttaaactatttcctttgtttcaatattttttatttatactaataaaatatgattatt 941
Query: 661 tattawttdwttccytgbbcgaytcacccaaccctttatgarggtcgggtgatgtcgcgc 720
||||| || |||| || ||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 942 tattaattaattccctgcgcgactcacccaaccctttatgagggtcgggtgatgtcgcgc 1001
Query: 721 a-ggtttagatatttttttaatatataattkttgttcttcatttaaaggtttat 773
| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1002 agggtttagatatttttttaatatataatttttgttcttcatttaaaggtttat 1055
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,425
Number of Sequences: 1807
Number of extensions: 18425
Number of successful extensions: 2068
Number of sequences better than 1.0e-20: 1
length of query: 773
length of database: 10,358,551
effective HSP length: 16
effective length of query: 757
effective length of database: 10,329,639
effective search space: 7819536723
effective search space used: 7819536723
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.3 bits)